CDS

Accession Number TCMCG017C06815
gbkey CDS
Protein Id OMP05965.1
Location complement(join(19993..21897,22007..22196,23507..23540,24069..24146,24283..24577))
GeneID InterPro:IPR007528
Organism Corchorus olitorius
locus_tag COLO4_08427

Protein

Length 833aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013759.1
Definition RINT-1 / TIP-1 family protein [Corchorus olitorius]
Locus_tag COLO4_08427

EGGNOG-MAPPER Annotation

COG_category DU
Description RINT1-like protein MAG2
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20474        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006623        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031312        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042406        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072665        [VIEW IN EMBL-EBI]
GO:0072666        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGTCTCTGCCAAGTCTCCCTCCATTCTCGACTCTCTCTAACACAGCCTCCTCCGCCCTGAACGCTAAACTCGCCACCGACCAAGACTTAACTTGTGCGCCGAGTCTCGTCTCCGAGTTGCTGACTCAGTGCGATGATCTGGATCGAGCTCTTATCCACCTTAATCGCACCCTCGAATCAAGCCTCGCATCTTACGCTTCCTTGTCCGATAGCATCGGCGACCTCTTTGGAGATTTGAGTTCGAAATTGACCGATCTTGAATCCGCCGTTTGTTTTAAGAGCTCCGTTGCAGATGGAGAAGGATTGGGAGAGGAGTTGCCGGCATTGGCGAAGGAGGTGGCGAGGGTGGAAACAGTTCGAGCATATGCTGATCCTATGCACTATGATCCAAGCATCCAACTCAAGTATTTCTTTTCTGCTACCTCTGTATACAATTGCAATCTAACACTAACGCCATTCTTTTCCTCGAAAACTATCTTGTATCTCTCAGAGATAGCATCAAAGCTTGATAATTTAGTTGGTGATATTGAAGATGCTGTCTCTTGCACAATGAACAAAAATATAATAAAGGATTCTACTGCACAGAGTCCAGAAGAAACACGCCTTGTCGCTATTAAAACACTGAAACTAACAGAAGACATCTTAACTTCAGTGACAAAGACACACCCTCAATGGGCACGCCTAGTCTCAGCGGTTGACCACAGAGTAGATCGGGCTCTAGCAATTTTAAGACCCCAAGCAATAGCAGATCATCGGGCCCTTCTCTCATCTCTCAGATGGCCACCACCACTTTCCAATTTGACTTCCTTAGGCTTTGATACAAGGAAATCAAATGATGTACCAAATCCCCTTTTTACCATGCAGGGTGATCTCAAACACATGTATTGTGAAAACTTTCTTGCCCTTTGCCGCCTGCAGGAGTTGCAGGGACAAAGAAAATCTCGGCAACTTGAGGGTCATAATCTGGATATTGCTCTTCACCAACCACTTTGGGCAGTTGAAGAGCTTGTGAATCCTGTATCTGTTGCATCCCAGCGCCATTTTTCAAAGTGGATTGAGAAGCCGGAATTCATATTTGCTCTGGTATATAAAATTACACGGGATTATGTTGATTCTATGGACGAGTTATTGCAACCATTGGTTGATGAATCAATGCTAACTGGTTATAGTTGTAGAGAAGAATGGATTTCAGCAATGGTATCCTCATTATCAACATACTTGGCAAAGGAGATATTCCCAATTTATGTTGGCCAAATGGAGGAAGAGAGTGTGACTGGTGTTCGATCACCTGCAAGGACATCTTGGCTCCATCTTGTTGACTTGATGGTGTCTTTTGACAAACGAATAAAATCTCTTGTAGAACAGTCTGGGCTATTGCTTTCCTATCGGGAAGGTGATACCCTTCCCAAGATTTCATCTCTATCCGTCTTCTGTGATCGACCTGACTGGCTTGATTTGTGGGCAGAAATAGAGCTAGCTGAAATACTGGAGAAACTAAAACCGGAGATGGATGAAGAAAAAAACTGGACTAAGAAAGTTCAGGGGGCGGTTCTCTCTAATTCTGATGATTATAAATCTCCTGTAGTTTCCAGCATCATTTTTCATTGCTTGTCTTCTTTGGTTGAGCGATGTCGATCATTGGCTACAGTTTCTTTGAGGTCAAGGTTTTTGAGATTAGCTGGTAAACCAGTTGTAAAAAAATTCTTGGATTGCTTACTTCTCAGGTGCCAAGAAGCTGAAGGATTGACTGCTTTAACAGATGATGATGCACTACTCAAAGTTGCAAACTCCATTAATGCAGCTCACTATGCTGAATCTACTTTAGAAGAATGGTCAGAGGACGTGTTTTTCCTTGAGATGGGATTGGATCGAGGTGGTCAACTTGGAACTGAATATAGTGGTAATGAGGCCCCAATTGAAGAGTATGGAAATGGTATTTTCGATGAAGAGATTCTTAAGTTAAAGGATTTTAGAACTGAGTGGGTTGAGAAGGTATCTGTGGTTGTTTTGAGAGGATTTGATGCTCGATGCAGAGATTACATGAAGAACAGGAGACAATGGGAGGAGAAAAATGAAGAAGGTTGGACTGTATCAAAGACATTGGTTGGGGCACTGGATTATTTGCAGGGAAAAATGTCAGTAGTGGAAGAAAATTTGAACAGGCTAGACTTTGTTGGGATGTGGAAAACTGTGGCAGCAGGGATAGATCGATTGATTCTTAATGGCATCCTTGTAACTAATGTGAGGTTTCATGATGATGGGGTAGAGAGATTCGGGTATGATTTGGAGGTCCTCTTTGGAGTTTTCAGGGCTTGGTGTTTGAGGCCTGAGGGTTTCTTCCCCAAAGTAAGTGAGGGTTTGAAATTGTTGAAGATGGAAAAGAAGCAACTTCATGGTAGCCCGGCGGGAGGGGAGAAATGGATGAAGGAGAACGGAATTAGGCATTTGAATGTAGCTGAGGTAGAAAAGATTGTGAAGAACAGAGTATTTACGAAGTAA
Protein:  
MESLPSLPPFSTLSNTASSALNAKLATDQDLTCAPSLVSELLTQCDDLDRALIHLNRTLESSLASYASLSDSIGDLFGDLSSKLTDLESAVCFKSSVADGEGLGEELPALAKEVARVETVRAYADPMHYDPSIQLKYFFSATSVYNCNLTLTPFFSSKTILYLSEIASKLDNLVGDIEDAVSCTMNKNIIKDSTAQSPEETRLVAIKTLKLTEDILTSVTKTHPQWARLVSAVDHRVDRALAILRPQAIADHRALLSSLRWPPPLSNLTSLGFDTRKSNDVPNPLFTMQGDLKHMYCENFLALCRLQELQGQRKSRQLEGHNLDIALHQPLWAVEELVNPVSVASQRHFSKWIEKPEFIFALVYKITRDYVDSMDELLQPLVDESMLTGYSCREEWISAMVSSLSTYLAKEIFPIYVGQMEEESVTGVRSPARTSWLHLVDLMVSFDKRIKSLVEQSGLLLSYREGDTLPKISSLSVFCDRPDWLDLWAEIELAEILEKLKPEMDEEKNWTKKVQGAVLSNSDDYKSPVVSSIIFHCLSSLVERCRSLATVSLRSRFLRLAGKPVVKKFLDCLLLRCQEAEGLTALTDDDALLKVANSINAAHYAESTLEEWSEDVFFLEMGLDRGGQLGTEYSGNEAPIEEYGNGIFDEEILKLKDFRTEWVEKVSVVVLRGFDARCRDYMKNRRQWEEKNEEGWTVSKTLVGALDYLQGKMSVVEENLNRLDFVGMWKTVAAGIDRLILNGILVTNVRFHDDGVERFGYDLEVLFGVFRAWCLRPEGFFPKVSEGLKLLKMEKKQLHGSPAGGEKWMKENGIRHLNVAEVEKIVKNRVFTK